Have you considered warmoth? You can do some really cool things with their stuff and you get to design it from the ground up. I did a custom mahogany strat with a super quilt top and an all mahogany neck. Super nice playing guitar. I want to do a tele build as well, and the body is going to cost me less than $400 for the body, and I'll just use a fender neck. All in all I'll spend less than $1000 on a guitar that fender charges $3,000 for.
Logan
Block inlay Gibson ES-335, 50th anniversary American Strat, '61 RI White SG, '62 RI Relic Strat, Replica Korina Flying V, Gold Tone Paul Beard Resonator, '58 Les Paul RI, American Highway 1 Fender Strat, Breedlove Acoustic, Stonetree Joe Bonamassa Custom, HIWATT Lead 100R, Reeves Custom 30.